<div dir="ltr"><div>Hello Silvia and all, <br></div><div> Run 16148 has been cooked and the recon files can be found under /volatile/clas12/rg-c/production/calib/calib/recon/016148/</div><div>The calib-train skims can be found under /volatile/clas12/rg-c/production/calib/calib/train/</div><div><br></div><div>Regards,</div><div>Mohammad. <br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Tue, Jun 21, 2022 at 5:00 PM <a href="mailto:mhattawy@odu.edu">mhattawy@odu.edu</a> <<a href="mailto:mohammad.hattawy@gmail.com">mohammad.hattawy@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr"><div>Hello Silvia, <br></div><div> I was notified by Raffa that the new release, 5.0.2_8.1.1, is ready. I used it with the updated yaml file that comes with it and edited the yaml file to have the right calib schema directory from the same release (/group/clas12/packages/clara/5.0.2_8.1.1/plugins/clas12/config/data.yaml). The updated yaml file that I am using /work/clas12/rg-c/rgc-cooking/yaml/pass0v0_811.yaml</div><div>Raffa, here is my generated json file for the workflow of cooking 16148 with all the updates /work/clas12/rg-c/rgc-cooking/rgc-dra-calib-16148.json</div><div><br></div><div>I did submit this cooking. <br></div><div><br></div><div>Mohammad<br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Tue, Jun 21, 2022 at 4:14 PM <<a href="mailto:silvia@jlab.org" target="_blank">silvia@jlab.org</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">Ok, sorry! Then let's cook 16148 :-)<br>
<br>
> FYI, 16147 is a junk run <a href="https://clasweb.jlab.org/rcdb/runs/info/16147" rel="noreferrer" target="_blank">https://clasweb.jlab.org/rcdb/runs/info/16147</a><br>
><br>
> On Tue, Jun 21, 2022 at 12:02 PM Silvia Niccolai <<a href="mailto:silvia@jlab.org" target="_blank">silvia@jlab.org</a>> wrote:<br>
><br>
>> Yes, the plan was already established yesterday, cooking 16147 or 16148<br>
>> as<br>
>> soon as coatjava was ready.<br>
>><br>
>> Sent from my iPhone<br>
>><br>
>> On 21 Jun 2022, at 11:46, Sebastian Kuhn <<a href="mailto:kuhn@jlab.org" target="_blank">kuhn@jlab.org</a>> wrote:<br>
>><br>
>> Great! Then we can ask Mohammad to cook run 16148 right afterwards.<br>
>><br>
>> Thanks - Sebastian<br>
>><br>
>> On Jun 21, 2022, at 11:41 AM, Raffaella De Vita <<a href="mailto:devita@jlab.org" target="_blank">devita@jlab.org</a>> wrote:<br>
>><br>
>> Hi Sebastian,<br>
>><br>
>> We are in the process of tagging a new release with the fixes to the<br>
>> raster x/y signal numbering. It will be done by lunch time.<br>
>><br>
>> Best regards,<br>
>> Raffaella<br>
>><br>
>> On 21 Jun 2022, at 11:37, Sebastian Kuhn <<a href="mailto:kuhn@jlab.org" target="_blank">kuhn@jlab.org</a>> wrote:<br>
>><br>
>> I hope this log entry:<br>
>> <a href="https://logbooks.jlab.org/entry/4005161" rel="noreferrer" target="_blank">https://logbooks.jlab.org/entry/4005161</a><br>
>> shows that the fix has been made. I cc’d Raffaella so she can weigh<br>
>> in: Do<br>
>> we need for any other changes before we can cook one 10.55 GeV polarized<br>
>> NH3 run?<br>
>><br>
>> Thanks - Sebastian<br>
>><br>
>> On Jun 21, 2022, at 11:28 AM, Silvia Niccolai <<a href="mailto:silvia@jlab.org" target="_blank">silvia@jlab.org</a>> wrote:<br>
>><br>
>> I think there was a bug in raster + beam offset implementation.<br>
>> Yesterday<br>
>> she asked us to wait.<br>
>><br>
>> Sent from my iPhone<br>
>><br>
>> On 21 Jun 2022, at 11:19, Sebastian Kuhn <<a href="mailto:kuhn@jlab.org" target="_blank">kuhn@jlab.org</a>> wrote:<br>
>><br>
>> Remind me again - what changes (that HAVEN’T been implemented yet)<br>
>> are<br>
>> we awaiting? I can’t find the relevant email by Raffa...<br>
>><br>
>> On Jun 21, 2022, at 10:49 AM, Silvia Niccolai <<a href="mailto:silvia@jlab.org" target="_blank">silvia@jlab.org</a>> wrote:<br>
>><br>
>> Hi Sebastian,<br>
>> We will cook 10.6 GeV data once we have the updated coatjava that<br>
>> Raffaella mentioned yesterday.<br>
>> Best regards,<br>
>> Silvia<br>
>><br>
>> Sent from my iPhone<br>
>><br>
>> On 21 Jun 2022, at 10:45, Sebastian Kuhn <<a href="mailto:kuhn@jlab.org" target="_blank">kuhn@jlab.org</a>> wrote:<br>
>><br>
>> Hi Maxime,<br>
>><br>
>> I hope you got my new table of asymmetry vs. Q2 for the 2.21 GeV run.<br>
>> Meanwhile, we should also think about looking at a 10.55 run. Mohammad,<br>
>> I<br>
>> lost track on what kind of runs have already been requested for cooking<br>
>> from the 10.55 GeV era. If we don’t have a polarized NH3 run already,<br>
>> I<br>
>> would propose the most recent one - 16148 - which seems went reasonably<br>
>> well (63% polarization which is about as good as we got).<br>
>><br>
>> - Sebastian<br>
>><br>
>> On Jun 21, 2022, at 10:27 AM, DEFURNE Maxime <<a href="mailto:Maxime.Defurne@cea.fr" target="_blank">Maxime.Defurne@cea.fr</a>><br>
>> wrote:<br>
>><br>
>> Hi Mohammad,<br>
>><br>
>> Thanks for the run 16078. I already took a look at them yesterday and<br>
>> things look very nice. I am checking the code once more before sending<br>
>> everybody the result but the target is indeed polarized ;) I need to<br>
>> also<br>
>> implement the asymmetry to small q2 value, although expected smaller,<br>
>> we<br>
>> have much more statistics there.<br>
>><br>
>> Best,<br>
>><br>
>> Maxime<br>
>> ------------------------------<br>
>> *De :* <a href="mailto:mhattawy@odu.edu" target="_blank">mhattawy@odu.edu</a> <<a href="mailto:mohammad.hattawy@gmail.com" target="_blank">mohammad.hattawy@gmail.com</a>><br>
>> *Envoyé :* mardi 21 juin 2022 10:18:54<br>
>> *À :* DEFURNE Maxime<br>
>> *Cc :* Nathan Baltzell; Raffaella De Vita; Silvia Niccolai<br>
>> *Objet :* Re: [EXTERNAL] ABout the elastic analysis<br>
>><br>
>> Hello Maxime,<br>
>> That looks good. The 386 files of run 16078 have finished<br>
>> post-processing.<br>
>><br>
>> Regards,<br>
>> Mohammad.<br>
>><br>
>> On Mon, Jun 20, 2022 at 5:30 PM DEFURNE Maxime <<a href="mailto:Maxime.Defurne@cea.fr" target="_blank">Maxime.Defurne@cea.fr</a>><br>
>> wrote:<br>
>><br>
>>> Hello,<br>
>>><br>
>>> I have taken a look at the run post-processed by Mohammad. As you all<br>
>>> worked a lot to get it, please be the first to see an asymmetry on<br>
>>> elastic.<br>
>>> here is w2 for hel=1 (red) and -1 (blue).<br>
>>><br>
>>> It looks good. Hopefully I will get all post-processed files soon.<br>
>>><br>
>>> Cheers,<br>
>>><br>
>>> Maxime<br>
>>> ------------------------------<br>
>>> *De :* DEFURNE Maxime<br>
>>> *Envoyé :* lundi 20 juin 2022 21:02:41<br>
>>> *À :* <a href="mailto:mhattawy@odu.edu" target="_blank">mhattawy@odu.edu</a>; Nathan Baltzell<br>
>>> *Cc :* Raffaella De Vita; Silvia Niccolai<br>
>>> *Objet :* RE: [EXTERNAL] ABout the elastic analysis<br>
>>><br>
>>> Having lunch right now but will do as soon as everything runs smoothly<br>
>>> in<br>
>>> the counting house.<br>
>>><br>
>>> Thank you Mohammad ;)<br>
>>> ------------------------------<br>
>>> *De :* <a href="mailto:mhattawy@odu.edu" target="_blank">mhattawy@odu.edu</a> <<a href="mailto:mohammad.hattawy@gmail.com" target="_blank">mohammad.hattawy@gmail.com</a>><br>
>>> *Envoyé :* lundi 20 juin 2022 20:17:47<br>
>>> *À :* Nathan Baltzell<br>
>>> *Cc :* Raffaella De Vita; DEFURNE Maxime; Silvia Niccolai<br>
>>> *Objet :* Re: [EXTERNAL] ABout the elastic analysis<br>
>>><br>
>>> Hello Maxime,<br>
>>> The post-processed data are accumulating under<br>
>>> /volatile/clas12/rg-c/production/calib/calib/recon/016078/<br>
>>> Please check them and let me know.<br>
>>><br>
>>> Mohammad<br>
>>><br>
>>> On Mon, Jun 20, 2022 at 1:43 PM <a href="mailto:mhattawy@odu.edu" target="_blank">mhattawy@odu.edu</a> <<br>
>>> <a href="mailto:mohammad.hattawy@gmail.com" target="_blank">mohammad.hattawy@gmail.com</a>> wrote:<br>
>>><br>
>>>> Definitely there is a clever way. Found it, no worries.<br>
>>>><br>
>>>> On Mon, Jun 20, 2022 at 1:35 PM <a href="mailto:mhattawy@odu.edu" target="_blank">mhattawy@odu.edu</a> <<br>
>>>> <a href="mailto:mohammad.hattawy@gmail.com" target="_blank">mohammad.hattawy@gmail.com</a>> wrote:<br>
>>>><br>
>>>>> Thanks Nathan.<br>
>>>>> Is there a clever faster way than doing the 386 files one-by-one?<br>
>>>>> I have all the files written in this file<br>
>>>>> /work/clas12/rg-c/rgc-cooking/16078_recon_files.txt<br>
>>>>><br>
>>>>> Mohammad<br>
>>>>><br>
>>>>> On Mon, Jun 20, 2022 at 1:25 PM Nathan Baltzell <<a href="mailto:baltzell@jlab.org" target="_blank">baltzell@jlab.org</a>><br>
>>>>> wrote:<br>
>>>>><br>
>>>>>> Here's corresponding coatjava and clara installs:<br>
>>>>>><br>
>>>>>> /work/clas12/users/baltzell/iss864-invhel<br>
>>>>>> /work/clas12/users/baltzell/clara-iss864-invhel<br>
>>>>>><br>
>>>>>> If you want to use them long-term, please copy them to somewhere<br>
>>>>>> under<br>
>>>>>> your ownership.<br>
>>>>>><br>
>>>>>> Let's not rerun reconstruction again on an entire RG-C 2-GeV run<br>
>>>>>> *just* to address this helicity issue. Instead, just rerun<br>
>>>>>> postprocessing,<br>
>>>>>> manually, it's very fast. If it's too cumbersome, I can run it for<br>
>>>>>> you, just say so. But if there's some *other* reason to rerun full<br>
>>>>>> recon, sure, go for it.<br>
>>>>>><br>
>>>>>> I confirmed the file you sent Maxime looks as expected, with delay<br>
>>>>>> correction performed and inserted in REC::Event.<br>
>>>>>><br>
>>>>>> -Nathan<br>
>>>>>><br>
>>>>>><br>
>>>>>><br>
>>>>>> On Jun 20, 2022, at 1:07 PM, Nathan Baltzell <<a href="mailto:baltzell@jlab.org" target="_blank">baltzell@jlab.org</a>><br>
>>>>>> wrote:<br>
>>>>>><br>
>>>>>> It'd need to be installed inside clara, as always. Please, no need<br>
>>>>>> for ALL CAPS. I can install it for you, will do it in a bit.<br>
>>>>>><br>
>>>>>> But you really don't want to rerun recon just for this.<br>
>>>>>> Postprocessing is fast, <<1% of recon CPU time, just do that<br>
>>>>>> manually for<br>
>>>>>> this time.<br>
>>>>>><br>
>>>>>> -Nathan<br>
>>>>>><br>
>>>>>><br>
>>>>>> On Jun 20, 2022, at 1:04 PM, <a href="mailto:mhattawy@odu.edu" target="_blank">mhattawy@odu.edu</a> <<br>
>>>>>> <a href="mailto:mohammad.hattawy@gmail.com" target="_blank">mohammad.hattawy@gmail.com</a>> wrote:<br>
>>>>>><br>
>>>>>> between 12:42 and 12:54 I was reading Raffa's email and followed her<br>
>>>>>> instructions.<br>
>>>>>><br>
>>>>>> I will be using /work/clas12/users/baltzell/iss864-invhel/,<br>
>>>>>> SO NOW, How to use this on a bigger scale cooking, not file-by-file?<br>
>>>>>><br>
>>>>>> On Mon, Jun 20, 2022 at 12:58 PM Nathan Baltzell <<a href="mailto:baltzell@jlab.org" target="_blank">baltzell@jlab.org</a>><br>
>>>>>> wrote:<br>
>>>>>><br>
>>>>>>> When I emailed at 12:42, that exact install was on the development<br>
>>>>>>> branch, not iss864. Changing it afterwards won't help!<br>
>>>>>>><br>
>>>>>>> Anyway, I just confirmed that on the correct branch (e.g.<br>
>>>>>>> /work/clas12/users/baltzell/iss864-invhel) postprocess behaves as<br>
>>>>>>> expected. You can just use that install if you want.<br>
>>>>>>><br>
>>>>>>><br>
>>>>>>><br>
>>>>>>> On Jun 20, 2022, at 12:51 PM, Nathan Baltzell <<a href="mailto:baltzell@jlab.org" target="_blank">baltzell@jlab.org</a>><br>
>>>>>>> wrote:<br>
>>>>>>><br>
>>>>>>> Where exactly is the coatjava that you installed inside that clara?<br>
>>>>>>><br>
>>>>>>><br>
>>>>>>><br>
>>>>>>> On Jun 20, 2022, at 12:50 PM, <a href="mailto:mhattawy@odu.edu" target="_blank">mhattawy@odu.edu</a> <<br>
>>>>>>> <a href="mailto:mohammad.hattawy@gmail.com" target="_blank">mohammad.hattawy@gmail.com</a>> wrote:<br>
>>>>>>><br>
>>>>>>> Hello Raffaella and Nathan,<br>
>>>>>>> I did checkout the branch.<br>
>>>>>>> >git checkout iss864-invhel<br>
>>>>>>> Branch iss864-invhel set up to track remote branch iss864-invhel<br>
>>>>>>> from<br>
>>>>>>> origin.<br>
>>>>>>> Switched to a new branch 'iss864-invhel'<br>
>>>>>>> <a href="http://ifarm1901.jlab.org" rel="noreferrer" target="_blank">ifarm1901.jlab.org</a>> git branch<br>
>>>>>>> development<br>
>>>>>>> * iss864-invhel<br>
>>>>>>><br>
>>>>>>> Should I re-install clara and rerun the suggested postprocessing<br>
>>>>>>> command line?<br>
>>>>>>><br>
>>>>>>> Mohammad<br>
>>>>>>><br>
>>>>>>><br>
>>>>>>><br>
>>>>>>> On Mon, Jun 20, 2022 at 12:42 PM Nathan Baltzell<br>
>>>>>>> <<a href="mailto:baltzell@jlab.org" target="_blank">baltzell@jlab.org</a>><br>
>>>>>>> wrote:<br>
>>>>>>><br>
>>>>>>>> Where exactly is the coatjava that you installed inside clara? If<br>
>>>>>>>> it's /work/clas12/mhattawy/rgc_software/clas12-offline-software,<br>
>>>>>>>> that is<br>
>>>>>>>> just the development branch.<br>
>>>>>>>><br>
>>>>>>>><br>
>>>>>>>><br>
>>>>>>>> On Jun 20, 2022, at 12:39 PM, <a href="mailto:mhattawy@odu.edu" target="_blank">mhattawy@odu.edu</a> <<br>
>>>>>>>> <a href="mailto:mohammad.hattawy@gmail.com" target="_blank">mohammad.hattawy@gmail.com</a>> wrote:<br>
>>>>>>>><br>
>>>>>>>> Hello Raffaella, Nathan, and All,<br>
>>>>>>>> Raffa, I did clone the version of the software that I was<br>
>>>>>>>> directed to from your link<br>
>>>>>>>> <a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_tree_iss864-2Dinvhel&d=DwIFaQ&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=a6-vv4xNyCmNBQlVk6mXTAjszd99dQSpaWxazzVUCkyV5yBe48m5-JM2J_nlcJvw&s=kgTPmk7h9yeB4Kluj79HkQgTblJHpSYVRl6HIu0kkOc&e=" rel="noreferrer" target="_blank">https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_tree_iss864-2Dinvhel&d=DwIFaQ&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=a6-vv4xNyCmNBQlVk6mXTAjszd99dQSpaWxazzVUCkyV5yBe48m5-JM2J_nlcJvw&s=kgTPmk7h9yeB4Kluj79HkQgTblJHpSYVRl6HIu0kkOc&e=</a><br>
>>>>>>>> <<a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_tree_iss864-2Dinvhel&d=DwMFaQ&c=CJqEzB1piLOyyvZjb8YUQw&r=HLszBssMDrxg1suTls0aX2y52oDK_fWrLNLTgw_5saE&m=Lm52AsyFrGfCpnuw_4XEX04SXhHewq1h7-l6AG6pBgvLkllJRiquG3mfypzxbVEZ&s=40vll724iZdXMUT1HIz-GqUr1uvWYRAPtz1Lk8Dorjk&e=" rel="noreferrer" target="_blank">https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_tree_iss864-2Dinvhel&d=DwMFaQ&c=CJqEzB1piLOyyvZjb8YUQw&r=HLszBssMDrxg1suTls0aX2y52oDK_fWrLNLTgw_5saE&m=Lm52AsyFrGfCpnuw_4XEX04SXhHewq1h7-l6AG6pBgvLkllJRiquG3mfypzxbVEZ&s=40vll724iZdXMUT1HIz-GqUr1uvWYRAPtz1Lk8Dorjk&e=</a>><br>
>>>>>>>><br>
>>>>>>>> Nathan, I followed your instructions:<br>
>>>>>>>> > setenv COATJAVA<br>
>>>>>>>> /work/clas12/mhattawy/rgc_software/myClara/plugins/clas12/<br>
>>>>>>>> > $COATJAVA/bin/postprocess -q 1 -d 1 -o<br>
>>>>>>>> /volatile/clas12/rg-c/production/calib_myclara/calib/recon/016078/post_rec_clas_016078.evio.00000.hipo<br>
>>>>>>>> /volatile/clas12/rg-c/production/calib_myclara/calib/recon/016078/rec_clas_016078.evio.00000.hipo<br>
>>>>>>>><br>
>>>>>>>> I have seen errors like in the attachment.<br>
>>>>>>>><br>
>>>>>>>> Maxime, I dont think that worked, but you can check the output<br>
>>>>>>>><br>
>>>>>>>> /volatile/clas12/rg-c/production/calib_myclara/calib/recon/016078/post_rec_clas_016078.evio.00000.hipo<br>
>>>>>>>><br>
>>>>>>>> Mohammad.<br>
>>>>>>>><br>
>>>>>>>> On Mon, Jun 20, 2022 at 11:54 AM Nathan Baltzell<br>
>>>>>>>> <<a href="mailto:baltzell@jlab.org" target="_blank">baltzell@jlab.org</a>><br>
>>>>>>>> wrote:<br>
>>>>>>>><br>
>>>>>>>>> The fix is only in postprocessing, so no need to rereconstruct<br>
>>>>>>>>> yet<br>
>>>>>>>>> again, but just:<br>
>>>>>>>>><br>
>>>>>>>>> setenv COATJAVA /path/to/correct/coatjava<br>
>>>>>>>>> OR<br>
>>>>>>>>> setenv COATJAVA /path/to/correct/clara_home/plugins/clas12<br>
>>>>>>>>><br>
>>>>>>>>> and then<br>
>>>>>>>>><br>
>>>>>>>>> $COATJAVA/bin/postprocess -q 1 -d 1 -o out.hipo in.hipo<br>
>>>>>>>>><br>
>>>>>>>>> -Nathan<br>
>>>>>>>>><br>
>>>>>>>>> On Jun 20, 2022, at 11:42 AM, Raffaella De Vita <<br>
>>>>>>>>> <a href="mailto:Raffaella.Devita@ge.infn.it" target="_blank">Raffaella.Devita@ge.infn.it</a>> wrote:<br>
>>>>>>>>><br>
>>>>>>>>> Hi Mohammad,<br>
>>>>>>>>><br>
>>>>>>>>> is the Clara installation you used for this using the code<br>
>>>>>>>>> compiled<br>
>>>>>>>>> in /work/clas12/mhattawy/rgc_software/clas12-offline-software ?<br>
>>>>>>>>> It seems that is on the development branch and not on the<br>
>>>>>>>>> specific<br>
>>>>>>>>> branch where the fix was implemented.<br>
>>>>>>>>><br>
>>>>>>>>> Raffaella<br>
>>>>>>>>><br>
>>>>>>>>> On 20 Jun 2022, at 11:25, DEFURNE Maxime <<a href="mailto:Maxime.Defurne@cea.fr" target="_blank">Maxime.Defurne@cea.fr</a>><br>
>>>>>>>>> wrote:<br>
>>>>>>>>><br>
>>>>>>>>> Hi Mohammad, Hi Raffaella,<br>
>>>>>>>>><br>
>>>>>>>>> In the re-cooked run 16078, I am supposed to have the helicity<br>
>>>>>>>>> information? if yes, it is still filled with 0. If not, then I am<br>
>>>>>>>>> sorry for<br>
>>>>>>>>> the inconvenience.<br>
>>>>>>>>><br>
>>>>>>>>> Best,<br>
>>>>>>>>><br>
>>>>>>>>> Maxime<br>
>>>>>>>>> ------------------------------<br>
>>>>>>>>> *De :* <a href="mailto:mhattawy@odu.edu" target="_blank">mhattawy@odu.edu</a> <<a href="mailto:mohammad.hattawy@gmail.com" target="_blank">mohammad.hattawy@gmail.com</a>><br>
>>>>>>>>> *Envoyé :* lundi 20 juin 2022 15:17:42<br>
>>>>>>>>> *À :* Silvia Niccolai<br>
>>>>>>>>> *Cc :* DEFURNE Maxime; Sebastian Kuhn; Mohammad Hattawy; Eugene<br>
>>>>>>>>> Pasyuk; Angela Biselli; Noemie Pilleux; Nathan Baltzell;<br>
>>>>>>>>> Raffaella De Vita<br>
>>>>>>>>> *Objet :* Re: [EXTERNAL] ABout the elastic analysis<br>
>>>>>>>>><br>
>>>>>>>>> Hello All,<br>
>>>>>>>>> run 16078 has been re-cooked with the updated clara and the<br>
>>>>>>>>> calib trains can be found under<br>
>>>>>>>>> /volatile/clas12/rg-c/production/calib_myclara/calib/train<br>
>>>>>>>>> the recon files can be found under<br>
>>>>>>>>> /volatile/clas12/rg-c/production/calib_myclara/calib/recon/016078<br>
>>>>>>>>><br>
>>>>>>>>> best regards,<br>
>>>>>>>>> Mohammad.<br>
>>>>>>>>><br>
>>>>>>>>> On Sun, Jun 19, 2022 at 6:50 PM Silvia Niccolai <<a href="mailto:silvia@jlab.org" target="_blank">silvia@jlab.org</a>><br>
>>>>>>>>> wrote:<br>
>>>>>>>>><br>
>>>>>>>>>> That run will now also have good FTOF calibration, so proton ID<br>
>>>>>>>>>> should be ok.<br>
>>>>>>>>>><br>
>>>>>>>>>> Sent from my iPhone<br>
>>>>>>>>>><br>
>>>>>>>>>> On 19 Jun 2022, at 18:23, DEFURNE Maxime <<a href="mailto:Maxime.Defurne@cea.fr" target="_blank">Maxime.Defurne@cea.fr</a>><br>
>>>>>>>>>> wrote:<br>
>>>>>>>>>><br>
>>>>>>>>>> <br>
>>>>>>>>>> Awesome! THank you Mohammad :D<br>
>>>>>>>>>> ------------------------------<br>
>>>>>>>>>> *De :* <a href="mailto:mhattawy@odu.edu" target="_blank">mhattawy@odu.edu</a> <<a href="mailto:mohammad.hattawy@gmail.com" target="_blank">mohammad.hattawy@gmail.com</a>><br>
>>>>>>>>>> *Envoyé :* lundi 20 juin 2022 00:17:18<br>
>>>>>>>>>> *À :* Sebastian Kuhn<br>
>>>>>>>>>> *Cc :* Mohammad Hattawy; DEFURNE Maxime; Eugene Pasyuk; Silvia<br>
>>>>>>>>>> Niccolai; Angela<br>
>>>>>>>>>> <a href="mailto:Biselli%3Bnoemie.pilleux@universite-paris-saclay.fr" target="_blank">Biselli;noemie.pilleux@universite-paris-saclay.fr</a>;<br>
>>>>>>>>>> Nathan Baltzell; Raffaella De Vita<br>
>>>>>>>>>> *Objet :* Re: [EXTERNAL] ABout the elastic analysis<br>
>>>>>>>>>><br>
>>>>>>>>>> Hello All,<br>
>>>>>>>>>> I cloned<br>
>>>>>>>>>> <a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_tree_iss864-2Dinvhel&d=DwIFaQ&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=a6-vv4xNyCmNBQlVk6mXTAjszd99dQSpaWxazzVUCkyV5yBe48m5-JM2J_nlcJvw&s=kgTPmk7h9yeB4Kluj79HkQgTblJHpSYVRl6HIu0kkOc&e=" rel="noreferrer" target="_blank">https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_tree_iss864-2Dinvhel&d=DwIFaQ&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=a6-vv4xNyCmNBQlVk6mXTAjszd99dQSpaWxazzVUCkyV5yBe48m5-JM2J_nlcJvw&s=kgTPmk7h9yeB4Kluj79HkQgTblJHpSYVRl6HIu0kkOc&e=</a><br>
>>>>>>>>>> <<a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_tree_iss864-2Dinvhel&d=DwMF-g&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=DUmm9BWTs5kQtLrlaHgKeP0oA_d8S0_eoLza5ta2aGgyOt7-9OZaLhg2g29SySEX&s=-dLfra9j7gnHmhmYWFt_2EqzLKjxh518c1AftxGP-r0&e=" rel="noreferrer" target="_blank">https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_tree_iss864-2Dinvhel&d=DwMF-g&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=DUmm9BWTs5kQtLrlaHgKeP0oA_d8S0_eoLza5ta2aGgyOt7-9OZaLhg2g29SySEX&s=-dLfra9j7gnHmhmYWFt_2EqzLKjxh518c1AftxGP-r0&e=</a>><br>
>>>>>>>>>> and installed a custom clara under<br>
>>>>>>>>>> /work/clas12/mhattawy/rgc_software/myClara<br>
>>>>>>>>>><br>
>>>>>>>>>> With this build, run 16078 (<br>
>>>>>>>>>> <a href="https://clasweb.jlab.org/rcdb/runs/info/16078" rel="noreferrer" target="_blank">https://clasweb.jlab.org/rcdb/runs/info/16078</a>) has been<br>
>>>>>>>>>> resubmitted for cooking. Will give you a notification once data<br>
>>>>>>>>>> starts to<br>
>>>>>>>>>> get out of the farm.<br>
>>>>>>>>>><br>
>>>>>>>>>> Regards,<br>
>>>>>>>>>> Mohammad.<br>
>>>>>>>>>><br>
>>>>>>>>>> On Sun, Jun 19, 2022 at 5:13 PM Sebastian Kuhn <<a href="mailto:kuhn@jlab.org" target="_blank">kuhn@jlab.org</a>><br>
>>>>>>>>>> wrote:<br>
>>>>>>>>>><br>
>>>>>>>>>>> To be precise: Please recook the last NH3 run we took with 2<br>
>>>>>>>>>>> GeV<br>
>>>>>>>>>>> - I believe it’s 16078.<br>
>>>>>>>>>>><br>
>>>>>>>>>>> Thanks ! - Sebastian<br>
>>>>>>>>>>><br>
>>>>>>>>>>> On Jun 19, 2022, at 5:11 PM, Raffaella De Vita<br>
>>>>>>>>>>> <<a href="mailto:devita@jlab.org" target="_blank">devita@jlab.org</a>><br>
>>>>>>>>>>> wrote:<br>
>>>>>>>>>>><br>
>>>>>>>>>>> Dear All,<br>
>>>>>>>>>>><br>
>>>>>>>>>>> the issue with the inverted helicity-related signal has been<br>
>>>>>>>>>>> provisionally addressed by Nathan, see:<br>
>>>>>>>>>>> <a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_issues_864&d=DwIFaQ&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=a6-vv4xNyCmNBQlVk6mXTAjszd99dQSpaWxazzVUCkyV5yBe48m5-JM2J_nlcJvw&s=e_SZIzqmqm6pD4jVwgSfu2Y7LDjsSe6ihFLPNmCGCW0&e=" rel="noreferrer" target="_blank">https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_issues_864&d=DwIFaQ&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=a6-vv4xNyCmNBQlVk6mXTAjszd99dQSpaWxazzVUCkyV5yBe48m5-JM2J_nlcJvw&s=e_SZIzqmqm6pD4jVwgSfu2Y7LDjsSe6ihFLPNmCGCW0&e=</a><br>
>>>>>>>>>>> <<a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_issues_864&d=DwMF-g&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=DUmm9BWTs5kQtLrlaHgKeP0oA_d8S0_eoLza5ta2aGgyOt7-9OZaLhg2g29SySEX&s=S9_52cT9qH9_g5l5m4bTHlaYgOAVLb1SSEQStavi0VM&e=" rel="noreferrer" target="_blank">https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_issues_864&d=DwMF-g&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=DUmm9BWTs5kQtLrlaHgKeP0oA_d8S0_eoLza5ta2aGgyOt7-9OZaLhg2g29SySEX&s=S9_52cT9qH9_g5l5m4bTHlaYgOAVLb1SSEQStavi0VM&e=</a>><br>
>>>>>>>>>>><br>
>>>>>>>>>>> <a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_tree_iss864-2Dinvhel&d=DwIFaQ&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=a6-vv4xNyCmNBQlVk6mXTAjszd99dQSpaWxazzVUCkyV5yBe48m5-JM2J_nlcJvw&s=kgTPmk7h9yeB4Kluj79HkQgTblJHpSYVRl6HIu0kkOc&e=" rel="noreferrer" target="_blank">https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_tree_iss864-2Dinvhel&d=DwIFaQ&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=a6-vv4xNyCmNBQlVk6mXTAjszd99dQSpaWxazzVUCkyV5yBe48m5-JM2J_nlcJvw&s=kgTPmk7h9yeB4Kluj79HkQgTblJHpSYVRl6HIu0kkOc&e=</a><br>
>>>>>>>>>>> <<a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_tree_iss864-2Dinvhel&d=DwMF-g&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=DUmm9BWTs5kQtLrlaHgKeP0oA_d8S0_eoLza5ta2aGgyOt7-9OZaLhg2g29SySEX&s=-dLfra9j7gnHmhmYWFt_2EqzLKjxh518c1AftxGP-r0&e=" rel="noreferrer" target="_blank">https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_JeffersonLab_clas12-2Doffline-2Dsoftware_tree_iss864-2Dinvhel&d=DwMF-g&c=CJqEzB1piLOyyvZjb8YUQw&r=LNUyx07OPlPP7unJr9bKdw&m=DUmm9BWTs5kQtLrlaHgKeP0oA_d8S0_eoLza5ta2aGgyOt7-9OZaLhg2g29SySEX&s=-dLfra9j7gnHmhmYWFt_2EqzLKjxh518c1AftxGP-r0&e=</a>><br>
>>>>>>>>>>><br>
>>>>>>>>>>> Mohammad, can you proceed to create a custom Clara installation<br>
>>>>>>>>>>> from this branch and reprocess a small sample of 2 GeV data as<br>
>>>>>>>>>>> a test?<br>
>>>>>>>>>>><br>
>>>>>>>>>>> Best regards,<br>
>>>>>>>>>>> Raffaella<br>
>>>>>>>>>>><br>
>>>>>>>>>>><br>
>>>>>>>>>>> On 19 Jun 2022, at 16:11, Sebastian Kuhn <<a href="mailto:kuhn@jlab.org" target="_blank">kuhn@jlab.org</a>> wrote:<br>
>>>>>>>>>>><br>
>>>>>>>>>>> Hi Maxime,<br>
>>>>>>>>>>><br>
>>>>>>>>>>> great progress and very interesting results so far. Yes, I<br>
>>>>>>>>>>> agree<br>
>>>>>>>>>>> that hopefully things will be better with the new calibration<br>
>>>>>>>>>>> (i.e.,<br>
>>>>>>>>>>> protons are properly identified), although most of your protons<br>
>>>>>>>>>>> are in the<br>
>>>>>>>>>>> CD, correct? So we would need a better calibration of the cTOF.<br>
>>>>>>>>>>> In any case, I am a bit worried about the interplay of the<br>
>>>>>>>>>>> “transverse momentum cut” and the other purely angle-based<br>
>>>>>>>>>>> cuts, as those<br>
>>>>>>>>>>> are not orthogonal. I am actually a bit surprised that the<br>
>>>>>>>>>>> background under<br>
>>>>>>>>>>> the theta_p distribution is rather larger, while the background<br>
>>>>>>>>>>> underneath<br>
>>>>>>>>>>> Delta-phi is much smaller (albeit also peaking at 180 degrees,<br>
>>>>>>>>>>> as one would<br>
>>>>>>>>>>> expect from quasi-elastic scattering.). Maybe you could simply<br>
>>>>>>>>>>> assume (at<br>
>>>>>>>>>>> those low energies) that EVERY positively charge particle is a<br>
>>>>>>>>>>> proton, and<br>
>>>>>>>>>>> then plot the delta-p_p, delta-theta_p and delta-phi<br>
>>>>>>>>>>> distributions for all<br>
>>>>>>>>>>> events with electrons that are within cuts for W. Then start<br>
>>>>>>>>>>> applying cuts<br>
>>>>>>>>>>> on these 3 observables, plotting each with all cuts on the<br>
>>>>>>>>>>> other 2 (but not<br>
>>>>>>>>>>> on the observable itself). Hopefully the picture will become<br>
>>>>>>>>>>> clearer…<br>
>>>>>>>>>>><br>
>>>>>>>>>>> Anyway, of course you are correct that the real test will be<br>
>>>>>>>>>>> with<br>
>>>>>>>>>>> the (hopefully) upcoming 10.6 GeV data, at least until we have<br>
>>>>>>>>>>> a cludge<br>
>>>>>>>>>>> version of the analysis for the bad helicity signal issue we<br>
>>>>>>>>>>> had at 2 GeV.<br>
>>>>>>>>>>><br>
>>>>>>>>>>> Greetings - Sebastian<br>
>>>>>>>>>>><br>
>>>>>>>>>>> On Jun 18, 2022, at 11:27 PM, DEFURNE Maxime <<br>
>>>>>>>>>>> <a href="mailto:Maxime.Defurne@cea.fr" target="_blank">Maxime.Defurne@cea.fr</a>> wrote:<br>
>>>>>>>>>>><br>
>>>>>>>>>>> Hello everyone,<br>
>>>>>>>>>>><br>
>>>>>>>>>>> Sorry if it took me quite some time to debug my elastic<br>
>>>>>>>>>>> analysis<br>
>>>>>>>>>>> code. Here are some plots. I remind that delta Pe/delta Pp/<br>
>>>>>>>>>>> delta Theta are<br>
>>>>>>>>>>> the difference between the measured quantity and the expected<br>
>>>>>>>>>>> one computed<br>
>>>>>>>>>>> with the electron scattering angle. I show for one typical bin<br>
>>>>>>>>>>> but they<br>
>>>>>>>>>>> look roughly the same except at high q2. I will try to prepare<br>
>>>>>>>>>>> slides for<br>
>>>>>>>>>>> tomorrow or monday if RC meeting... It depends how early I wake<br>
>>>>>>>>>>> up as I am<br>
>>>>>>>>>>> a bit shifted in my habits.<br>
>>>>>>>>>>><br>
>>>>>>>>>>> It seems to me that delta theta is the most relevant variable<br>
>>>>>>>>>>> to<br>
>>>>>>>>>>> isolate elastic events with non-aligned/not-well calibrated<br>
>>>>>>>>>>> detector. By<br>
>>>>>>>>>>> the way, most of my protons are identified as pions (this is<br>
>>>>>>>>>>> why I had to<br>
>>>>>>>>>>> debug my code as I am going through all positive particles and<br>
>>>>>>>>>>> considered<br>
>>>>>>>>>>> the one with the smallest missing transverse momentum as the<br>
>>>>>>>>>>> best candidate<br>
>>>>>>>>>>> for my recoil proton). It also explains why I have already a<br>
>>>>>>>>>>> delta phi<br>
>>>>>>>>>>> (being the coplanarity angle of scattered electron and recoil<br>
>>>>>>>>>>> proton) very<br>
>>>>>>>>>>> sharp, but yet quite some nuclear background as indicated by<br>
>>>>>>>>>>> delta theta.<br>
>>>>>>>>>>><br>
>>>>>>>>>>> I think I can cross check the results of my fit by doing the<br>
>>>>>>>>>>> subtraction of positive and negative helicity of delta Theta<br>
>>>>>>>>>>> distribution:<br>
>>>>>>>>>>> I expect most of the background to subtract itself and only<br>
>>>>>>>>>>> remain the<br>
>>>>>>>>>>> elastic distribution arising from the asymmetry of +/-.<br>
>>>>>>>>>>><br>
>>>>>>>>>>> As soon as we have 10.5 GeV on polarized NH3 with helicity<br>
>>>>>>>>>>> information, I may be able to extract a Pb*Pt out of it with<br>
>>>>>>>>>>> this code. Let<br>
>>>>>>>>>>> me know if you want to see more specific things. I still need<br>
>>>>>>>>>>> to refine the<br>
>>>>>>>>>>> q2-estimate of the elastic measurement after background<br>
>>>>>>>>>>> subtraction. For<br>
>>>>>>>>>>> the analysis, do we want to look run by run to the elastic to<br>
>>>>>>>>>>> extract Pt<br>
>>>>>>>>>>> and store it in ccdb?<br>
>>>>>>>>>>><br>
>>>>>>>>>>> Best,<br>
>>>>>>>>>>><br>
>>>>>>>>>>> Maxime<br>
>>>>>>>>>>><br>
>>>>>>>>>>> <Theta_Theta.png><Theta_kp.png><Theta_pr.png><dvz_3.png><br>
>>>>>>>>>>> <dphi_3.png><dthp_3.png><dpp_3.png><dpe_3.png><W_3.png><br>
>>>>>>>>>>><br>
>>>>>>>>>>><br>
>>>>>>>>>>><br>
>>>>>>>>>>><br>
>>>>>>>>>>><br>
>>>>>>>>>><br>
>>>>>>>>>> --<br>
>>>>>>>>>> Best regards,<br>
>>>>>>>>>> Mohammad Hattawy.<br>
>>>>>>>>>><br>
>>>>>>>>>><br>
>>>>>>>>><br>
>>>>>>>>> --<br>
>>>>>>>>> Best regards,<br>
>>>>>>>>> Mohammad Hattawy.<br>
>>>>>>>>><br>
>>>>>>>>><br>
>>>>>>>>><br>
>>>>>>>>><br>
>>>>>>>><br>
>>>>>>>> --<br>
>>>>>>>> Best regards,<br>
>>>>>>>> Mohammad Hattawy.<br>
>>>>>>>> <Screenshot from 2022-06-20 12-37-47.png><br>
>>>>>>>><br>
>>>>>>>><br>
>>>>>>>><br>
>>>>>>><br>
>>>>>>> --<br>
>>>>>>> Best regards,<br>
>>>>>>> Mohammad Hattawy.<br>
>>>>>>><br>
>>>>>>><br>
>>>>>>><br>
>>>>>>><br>
>>>>>><br>
>>>>>> --<br>
>>>>>> Best regards,<br>
>>>>>> Mohammad Hattawy.<br>
>>>>>><br>
>>>>>><br>
>>>>>><br>
>>>>>><br>
>>>>><br>
>>>>> --<br>
>>>>> Best regards,<br>
>>>>> Mohammad Hattawy.<br>
>>>>><br>
>>>><br>
>>>><br>
>>>> --<br>
>>>> Best regards,<br>
>>>> Mohammad Hattawy.<br>
>>>><br>
>>><br>
>>><br>
>>> --<br>
>>> Best regards,<br>
>>> Mohammad Hattawy.<br>
>>><br>
>><br>
>><br>
>> --<br>
>> Best regards,<br>
>> Mohammad Hattawy.<br>
>><br>
>><br>
>><br>
>><br>
>><br>
>><br>
>><br>
><br>
> --<br>
> Best regards,<br>
> Mohammad Hattawy.<br>
><br>
<br>
<br>
</blockquote></div><br clear="all"><br>-- <br><div dir="ltr">Best regards,<br>Mohammad Hattawy.<br></div>
</blockquote></div><br clear="all"><br>-- <br><div dir="ltr" class="gmail_signature">Best regards,<br>Mohammad Hattawy.<br></div>