[Clas_offline] user_ana on centos62 with svn/scons

Mon Apr 29 09:15:53 EDT 2013

Hi Kijun,
Just tried your suggestion, same problem.
Did you manage yourself?
Silvia

On Mon, 29 Apr 2013, KiJun Park wrote:

> Dear Silvia,
>
> It seems to me that your problem is related with link CERNLIB.
> Have you tried to link CERNLIB with "/u/site/cernlib/x86_64_rhel6.old/2005/" ?
>
> Sincerely,
> Kijun
>
>
>
> ----- Original Message -----
> From: "Silvia Niccolai" <silvia at jlab.org>
> To: "Evan Phelps" <evan.phelps at gmail.com>
> Cc: "KiJun Park" <parkkj at jlab.org>, "clas offline" <clas_offline at jlab.org>
> Sent: Monday, April 29, 2013 5:15:39 AM
> Subject: Re: [Clas_offline] user_ana on centos62 with svn/scons
>
> Hello Evan,
> I just modified the file recsis_proc.tcl according to your suggestion,
> recompiled the whole reconstruction/ packages, but I still get the same
> problem with user_ana, it remains stuck at the prompt. Just to be more
> precise, here are the last output lines I get:
>
> ***************************************************************
> Defining to <paw> procedure, to launch a PAW session type: paw
>
> Defining to <ced> procedure, to launch a ced session type: ced
>
>
> RS> RZOPEN. record length:  8191 > maximum safe value (8191 words).
>  RZOPEN. You may have problems transferring your file to other systems
>          or writing it to tape.
> bnames: 1000
> RS>
> ***************************************************************
>
> To be compared with what I get on ifarml64, with an old user_ana
> executable (same inputfile, same tcl):
>
> **************************************************************
> Defining to <paw> procedure, to launch a PAW session type: paw
>
> Defining to <ced> procedure, to launch a ced session type: ced
>
> recsis_proc I: sending FPACK CMD: OPEN CLASINPUT UNIT=01 FILE="inputfile"
> READ RECL=32768 STATUS=OLD
>
> recsis_proc I: sending FPACK CMD: OPEN PROC1 UNIT=2 FILE="outfile1" WRITE
> RECL=32768 SPLITMB=2047 STATUS=NEW
>
> ...and then it runs fine...
> ****************************************************************
>
> Did it instead work for you? Did you produce an actual cooked file as
> output? If yes, could you please let me know your scons command line?
> Did you compile it at 32 or 64 bits? I tried first only with a bare
> "scons" command. The produced executable is the one giving me the above
> problem. I tried forcing 32 bits compilation, but got library/environment
> problems (I currently work with an environment provided to me by Johann).
>
> Any tips would be greatly appreciated.
>
> Best regards,
> Silvia
>
>
>
> On Fri, 26 Apr 2013, Evan Phelps wrote:
>
>> Kijun,
>>
>> I don't know if this is the same issue, but I'll pass on the relevant
>> part of a message I sent last December regarding getting dumped back
>> to the recsis prompt without error (see below).  The culprit, in my
>> case, was the tcl file, but after getting past that, I ran into
>> additional library incompatibilities that I have not revisited.
>>
>> *****************
>>
>> [...]  I noticed that the tcl procedure "inputfile" calls "fpack," and
>> that procedure does not complete its execution.  It seems to stop and
>> return to recsis on the following line:
>>
>> global rchar_control ifpack \
>>    fpk_cmd(1) fpk_cmd(2) fpk_cmd(3) fpk_cmd(4) fpk_cmd(5) \
>>    fpk_cmd(6) fpk_cmd(7) fpk_cmd(8) fpk_cmd(9) fpk_cmd(10)
>>
>> I'm not sure why this works in previous, non-CentOS62, environments,
>> since the TCL manual says that array elements cannot be referenced
>> globally.  It seems to work after correcting that. Here's the diff:
>>
>> [ephelps at ifarm1101 sim]$ diff
>> /group/clas/builds/2012.12.20_10.42/trunk/reconstruction/recsis/recsis_proc.tcl
>> ./recsis_proc.tcl
>> 282,285c282
>> <     global rchar_control ifpack \
>> <     fpk_cmd(1) fpk_cmd(2) fpk_cmd(3) fpk_cmd(4) fpk_cmd(5) \
>> <     fpk_cmd(6) fpk_cmd(7) fpk_cmd(8) fpk_cmd(9) fpk_cmd(10)
>> <
>> ---
>>>     global rchar_control ifpack fpk_cmd
>> 343c340
>> <     global rchar_control fpk_cmd(1)
>> ---
>>>     global rchar_control fpk_cmd
>>
>> On Fri, Apr 26, 2013 at 9:49 AM, KiJun Park <parkkj at jlab.org> wrote:
>>> Hi,
>>>
>>> I don't know whether this can help to solve your problem but ...
>>> Last week, Jlab CC installed "compat-libgfortran-41.i686", so maybe correction of your path to new-link could be an issue.
>>>
>>> Sincerely,
>>> Kijun
>>>
>>>
>>>
>>>
>>> ----- Original Message -----
>>> From: "Silvia Niccolai" <silvia at jlab.org>
>>> To: "Paul Mattione" <pmatt at jlab.org>
>>> Cc: "clas offline" <clas_offline at jlab.org>
>>> Sent: Monday, April 22, 2013 2:34:15 PM
>>> Subject: Re: [Clas_offline] user_ana on centos62 with svn/scons
>>>
>>> Hello Paul,
>>> I managed to build recsis and to have a user_ana executable on ifarm1102, but I had your same problem as you when launching it: it pauses and gives the prompt and seems like it hasn't found the inputfile, even if all is well defined in the tcl.
>>> Any input/suggestion would be greatly appreciated!!
>>> Regards,
>>> Silvia
>>>
>>>
>>> Sent from my iPhone
>>>
>>> On 22/apr/2013, at 20:28, Paul Mattione <pmatt at jlab.org> wrote:
>>>
>>>> Has anyone gotten an svn/scons build of user_ana to work (meaning: both compiled & run successfully with meaningful output) on simulated data on ifarm1102 (either a 32- or 64-bit build is fine)?  I tried searching the CLAS6 offline software wiki page and did not see any documentation/details on the currently existing builds.
>>>>
>>>> I have tried many different svn/scons builds and they do not work on my (old, previously working) MC tcl file, whereas the current ifarm1102 g14 make build works just fine on it.  The farthest I get on the svn/scons builds is that the cooking pauses during reading the tcl file, giving the user a prompt and expecting more input for some reason.  In addition to my own (g13), the attempted builds include (all within /group/clas/builds/):
>>>>
>>>> test3
>>>> 64bit (is this an ifarm1101 build?  It is unclear.)
>>>> 2012.12.20_10.42 (ifarm1101 or ifarm1102?)
>>>> centos62 (In addition, neither environment file has the correct $PREFIX assignment)
>>>>
>>>> Am I using the wrong build(s)?  If user_ana for these builds does indeed work, can someone send me a proven, working tcl file and full environment for them so I can try to diagnose what might be different between the make & scons builds of our software?
>>>>
>>>> I realize that everyone is busy with CLAS12, but CLAS6 software still needs to be supported.  Why hasn't fsgen been integrated into svn/scons yet?!?!?  I asked for this many months ago and it still isn't available.
>>>>
>>>> Thanks.
>>>>
>>>> - Paul
>>>>
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>>> --
>>> ---------------------------------------******
>>> Dr. Kijun Park
>>> Thomas Jefferson National Accelerator Facility
>>> Suit 5 Room 12_1/A102
>>> 12000 Jefferson Ave.
>>> Newport News VA 23606
>>> Phone 757-269-6989
>>>
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>>
>
> -- 
> ---------------------------------------******
> Dr. Kijun Park
> Thomas Jefferson National Accelerator Facility
> Suit 5 Room 12_1/A102
> 12000 Jefferson Ave.
> Newport News VA 23606
> Phone 757-269-6989
>