[Color_transp] Update to CT analysis directory

[Latif Kabir]

Dear All,

The CT shared analysis directory under `/work` disk has been reorganized 
and updated. libCT, hcana and replay are now under one repository called 
CT12GeV.

- `hallc_replay` has been added as a submodule to get update from other 
experiments.

- I moved all plots to the directory `PLOTS` and some scattered scripts 
to `scripts` inside `CTAnalyzer`.

- A backup of all previous files are under 
`/work/hallc/e1206107/Backup`  directory. In case I overwrote or ignored 
any previous file in the reorganization process, it can be recovered 
from there.

A detailed instruction for current directory structure is explained in 
github README file here: https://github.com/JeffersonLab/CT12GeV


Regards,

Latif


-- 

Postdoctoral Research Associate
Mississippi State University
(Stationed at Jefferson Lab)
web: jlab.org/~latif