[Solid_software] solid_gemc with apptainer at EL9

Zhiwen Zhao zwzhao at jlab.org
Tue Aug 27 17:42:15 EDT 2024


All

As root inside the container has some problems displaying graphics, we usually run analysis codes with a root 
installation outside.
At the latest ifarm ALMA9, a working root can be loaded as follows
run "module use /scigroup/cvmfs/hallb/clas12/sw/modulefiles" then "module load root"

Zhiwen

On 5/22/2024 3:44 PM, Zhiwen Zhao wrote:
> All
> 
> As new ifarm9 and farm have moved from EL7 to EL9 and /apps is removed, we need to update instruction to run solid_gemc
> 
> solid_gemc itself needs no change to run because it has been based on container for a while, but we need to use 
> singularity from apptainer package at /usr/bin/singularity instead from singularity at /apps/singularity/3.9.5
> This means there is no need to do "module load", but we need to add shared folder manually by "-B /group:/group -B /u:/u 
> -B /w/work:/work -B /w:/w -B /cache:/cache -B /volatile:/volatile -B /lustre:/lustre"
> 
> See the updated instruction at https://github.com/JeffersonLab/solid_release/blob/master/howto.md
> 
> by the way, as farm9 has no /site either, you want to remove /site/env/syscshrc and /site/env/syslogin in your .cshrc 
> and .login to avoid errors.
> 
> Zhiwen
> 


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