[Clas_offline] user_ana

Wed Mar 26 11:53:28 EDT 2014

Will, do you have any objection to what Silvia has suggested ?

"THE MAN WHO MAKES NO MISTAKES DOES NOT USUALLY MAKE ANYTHING"
                                                       PHELPS

> Hi Will,
> Good to know that someone still has claslib permissions :-)
> If I can give my opinion, I think that the specif fix under discussion
> (the one that allows user_ana to be run on the batch farm) should be
> included without further doubts in the official executable, as the one
> there right now is basically useless, working only interactively. You
> should just make sure that the only change in the packages since the last
> build was that one.
> Regards and thanks a lot for taking care of this.
> Silvia
>
>
> Sent from my iPhone
>
>> On 26/mar/2014, at 16:26, Will Phelps <wphelps at jlab.org> wrote:
>>
>> Hello Nikolai,
>> I am the CLAS librarian and I am discussing what to do with the builds
>> with Johann and Harut. So far it looks like I will not be changing the
>> /group/clas/builds/ production build until everyone has been notified. I
>> will create a separate build like /group/clas/builds/build_03_26_14/ or
>> something similar for collaborators to test out before changing the
>> production build. Any suggestions are welcome.
>> -Will
>>
>>> On Mar 26, 2014, at 11:20 AM, Nikolai Pivnyuk <pivnyuk at jlab.org> wrote:
>>>
>>>
>>>
>>>> I don't have access to the claslib account anymore. I'm not sure who
>>>> does.
>>>
>>>
>>>
>>> Does anybody know "who does" ?
>>>
>>>
>>>
>>>> If anyone wants to build the fixed version into /group/clas/builds,
>>>> they
>>>> could first log into ifarm1101 as claslib and run this:
>>>>
>>>> cd /group/clas/builds/src/clas-trunk
>>>> svn up
>>>> scons -j32 install
>>>>
>>>>
>>>>
>>>>
>>>> -- Johann <https://sites.google.com/site/theodoregoetz/>
>>>>
>>>>
>>>> On Tue, Mar 25, 2014 at 4:25 PM, Francois-Xavier Girod
>>>> <fxgirod at jlab.org>wrote:
>>>>
>>>>>
>>>>> One would think that
>>>>> /group/clas/builds/bin/user_ana
>>>>> should be consistent with
>>>>> /group/clas/builds/src/clas-trunk/reconstruction/recsis/retcl_yield.F
>>>>> but this source file is not consistent with the svn repository.
>>>>>
>>>>> /group/clas/builds/ is supposed to be updated manually (?).
>>>>>
>>>>> Best regards,
>>>>> FX
>>>>>
>>>>> ----- Original Message -----
>>>>> From: "Nikolai Pivnyuk" <pivnyuk at jlab.org>
>>>>> To: "Johann Goetz" <theodore.goetz at gmail.com>
>>>>> Cc: "clas offline" <clas_offline at jlab.org>
>>>>> Sent: Tuesday, March 25, 2014 4:13:27 PM
>>>>> Subject: Re: [Clas_offline] user_ana
>>>>>
>>>>> Johann,
>>>>>
>>>>>  ???????
>>>>>
>>>>> pivnyuk at ifarm1102:~>ll /group/clas/builds/bin/user_ana
>>>>> -rwxrwxr-x 1 claslib clasdev 4225915 Dec 18 14:33
>>>>> /group/clas/builds/bin/user_ana
>>>>>
>>>>>
>>>>>> This modification has been in the SVN repository since January,
>>>>>> 2014.
>>>>>> https://jlabsvn.jlab.org/svnroot/clas/trunk
>>>>>>
>>>>>> -- Johann <https://sites.google.com/site/theodoregoetz/>
>>>>>>
>>>>>>
>>>>>>> On Tue, Mar 25, 2014 at 2:32 PM, Silvia Niccolai <silvia at jlab.org>
>>>>>> wrote:
>>>>>>
>>>>>>> Hello all,
>>>>>>> Could this "trick" be implemented in the official clas-trunk, so
>>>>>>> that
>>>>>>> people don't have to check out, modify this routine and recompile
>>>>>>> everything?
>>>>>>> This issue has been known since about last summer...
>>>>>>> Thanks
>>>>>>> Silvia
>>>>>>>
>>>>>>> Sent from my iPhone
>>>>>>>
>>>>>>>> On 25/mar/2014, at 19:24, KiJun Park <parkkj at jlab.org> wrote:
>>>>>>>>
>>>>>>>> Hi,
>>>>>>>>
>>>>>>>> Perhaps your problem is related with source code not your input
>>>>>>>> bos
>>>>>>> file.
>>>>>>>> Many people already noticed this problem without knowing the
>>>>> reason.
>>>>>>>> (You may see lots of communications in CLAS_OFFLINE account)
>>>>>>>> The ifarm1102 and batch-farm are identical machines
>>>>> (CENTOS6.2/64bit),
>>>>>>> calling same LIBs,... etc.
>>>>>>>> No one really does not know why the error is occurred in only
>>>>>>>> batch
>>>>>>> mode, meantime an interactive mode is working fine.
>>>>>>>>
>>>>>>>> So far, there is a trick which is so far working.
>>>>>>>> You may try this too.
>>>>>>>> But this is not an ultimate solution.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> The source code in "retcl_yield.F" has
>>>>>>>> ---------------------------------------------------------
>>>>>>>> c
>>>>>>>> c look at the terminal input
>>>>>>>> c
>>>>>>>> IF (LINTER) THEN
>>>>>>>> call asynck_c(nbyt)
>>>>>>>> else
>>>>>>>> nbyt = 1
>>>>>>>> endif
>>>>>>>> ---------------------------------------------------------
>>>>>>>>
>>>>>>>>
>>>>>>>>>>>> change this "nbyt = 1" to  "nbyt = 0"
>>>>>>>>
>>>>>>>> I know, this does not make any sense.
>>>>>>>> Because in principle, the loop is going to be infinite when  "nbyt
>>>>> =
>>>>>>> 0"
>>>>>>> is engaged.
>>>>>>>>
>>>>>>>>       IF (LINTER) THEN
>>>>>>>>           call asynck_c(nbyt)
>>>>>>>>       else
>>>>>>>>          nbyt = 1
>>>>>>>>       endif
>>>>>>>>
>>>>>>>> re-compile it and submit your job.
>>>>>>>> good luck.
>>>>>>>>
>>>>>>>> Sincerely yours,
>>>>>>>> Kijun
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> ----- Original Message -----
>>>>>>>> From: "Nikolai Pivnyuk" <pivnyuk at jlab.org>
>>>>>>>> To: "clas offline" <clas_offline at jlab.org>
>>>>>>>> Sent: Tuesday, March 25, 2014 2:14:50 PM
>>>>>>>> Subject: [Clas_offline] user_ana
>>>>>>>>
>>>>>>>> Dear CLAS offliners,
>>>>>>>>
>>>>>>>> I have a problem with running user_ana on batch farm nodes.
>>>>>>>> To launch the job I currently use the same scripts which I have
>>>>> used a
>>>>>>> few
>>>>>>>> years ago without any problem. These scripts are
>>>>>>>> /volatile/clas/clasg10/pivnyuk/g10/mc/batch_pipp/send_to_farm.pl
>>>>>>>> and
>>>>>>>> /volatile/clas/clasg10/pivnyuk/g10/mc/batch_pipp/runmc.pl
>>>>>>>> In runmc.pl see just only quite small "recsis" block of the
>>>>>>>> script.
>>>>>>>> ---------------------------------------------------------------------
>>>>>>>> The problem looks likely as the input file
>>>>> /volatile/clas/clasg10/pivnyuk/g10/mc/outdir_pimi_p_resc_dc_0.02_de_0.08/eg_2.90/gpp0004.bos
>>>>>>>> is invisible for the user_ana.
>>>>>>>> It is just only my impression. I'm not absolutely sure about that.
>>>>>>>> ----------------------------------------------------------------------
>>>>>>>> Processing the same gpp0004.bos with user_ana but in INTERACTIVE
>>>>> MODE
>>>>>>> is
>>>>>>>> absolutely OK. No problem.
>>>>> -----------------------------------------------------------------------
>>>>>>>> More details (.tcl and output .log files etc.) are in the
>>>>> "user_ana"
>>>>>>>> attached file.
>>>>> ------------------------------------------------------------------------
>>>>>>>> Could somebody kindly have a look on my stuff ?
>>>>>>>> Thanks in advance,
>>>>>>>> Nikolai
>>>>>>>> _______________________________________________
>>>>>>>> Clas_offline mailing list
>>>>>>>> Clas_offline at jlab.org
>>>>>>>> https://mailman.jlab.org/mailman/listinfo/clas_offline
>>>>>>>>
>>>>>>>> --
>>>>>>>> ---------------------------------------******
>>>>>>>> Dr. Kijun Park
>>>>>>>> Physics Dept. Old Dominion University
>>>>>>>> Thomas Jefferson National Accelerator Facility
>>>>>>>> Suit 5 Room 12_1/A102
>>>>>>>> 12000 Jefferson Ave.
>>>>>>>> Newport News VA 23606
>>>>>>>> Phone 757-269-6989
>>>>>>>>
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